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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9113489_9113718_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9113489 - 9113718

Intron Length:

230

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTACGCCCC

5'SS Class:

major

3'SS Sequence:

TCCCTCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACATTAT

U12 Branch Point Sequence:

GGCACATTATCC

Flanking Amino Acid:

DAHLPLHTFPGIEKFKGSYL

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

1.2

52.1

45.1

Major BPS

63.3

0.33

1.1

41.2

Major PPT

74.5

0.55

0.7

68.2

25.5

Minor 5ss

38.5

-1.3

3.2

52.5

44.3

Minor BPS

46.6

-0.2

1.9

54.21

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046540

9110848 - 9114490

3643

ENSAPLT00000020233

9107376 - 9114490

7115