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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9131743_9131869_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
9131743 - 9131869

Intron Length:
127

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTC|GTGAGCAGC

5'SS Class:
major

3'SS Sequence:
GCTGTGCCGGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCCTCAC

U12 Branch Point Sequence:
CGACCCCTCACG

Flanking Amino Acid:
RIRFHDFLGDSWGILFSHPR

Intron Amino Acid Position:
31

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
60.1
0.24
1.3
55.8
43.4

Major BPS
60.1
0.25
1.1
62.9
34.3

Major PPT
60.4
0.23
1.1
54.2
41.5

Minor 5ss
35.8
-1.6
2.9
43.7
38.3

Minor BPS
44
-0.6
2.1
47.43
44.9

Associated Gene:

Gene:
PRDX6

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

9126964 - 9131961
4998