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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9142557_9143494_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9142557 - 9143494

Intron Length:

938

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

GCTCTCTGTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTGAA

U12 Branch Point Sequence:

CTTGACTGAAAG

Flanking Amino Acid:

SVVAYNNLIECPPTSVTPSA

Intron Amino Acid Position:

231

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

69.6

41.1

Major BPS

56.6

0.16

1.2

49.3

Major PPT

74.1

0.54

67.9

37.7

Minor 5ss

32.8

-2

3.1

39.9

40.3

Minor BPS

46.9

-0.3

1.9

54.58

45.8

Associated Gene:

Gene:

TADA1

Ensembl Gene ID:

ENSAPLG00000005434

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005616

9132168 - 9144693

12526