Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_9149536_9150890_R

Intron Information:

Intron Rank:

153903

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9149536 - 9150890

Intron Length:

1355

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTACAGTAC

5'SS Class:

major

3'SS Sequence:

TAATGATAACCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCTTTTTAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.5

0.27

1.1

54.4

39.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

57.7

0.17

1.1

49.4

Minor 5ss

34.9

-1.7

3.5

40.2

46.2

Minor BPS

71.1

0.52

1.3

69.97

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030292

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028847

9149222 - 9154240

5019