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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9166629_9171271_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9166629 - 9171271

Intron Length:

4643

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGA|GCTAGGTTA

5'SS Class:

weak_major

3'SS Sequence:

TTCTCTAGTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGATAT

U12 Branch Point Sequence:

TATTCTCTAGTT

Flanking Amino Acid:

FLLLLPHLLQDLCLSRVFPP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.1

0.05

1.4

54.6

42.9

Major BPS

48.5

-0

1.4

46.7

Major PPT

78.9

0.65

0.9

77.5

35.4

Minor 5ss

27.6

-2.6

4.1

35.8

41.9

Minor BPS

0.27

1.9

77.87

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024390

9166507 - 9171743

5237