Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_9308910_9309059_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9308910 - 9309059

Intron Length:

150

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGTAG

5'SS Class:

major

3'SS Sequence:

CTTGTGGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

CTCTTTTTACTT

Flanking Amino Acid:

EPLKFSPEKKKKRCKYKSEK

Intron Amino Acid Position:

1098

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

60.1

41.3

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

76.5

0.6

72.6

42.4

Minor 5ss

34.4

-1.8

3.5

49.3

Minor BPS

56.3

0.28

1.6

69.97

42.5

Associated Gene:

Gene:

SUCO

Ensembl Gene ID:

ENSAPLG00000004827

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038122

9308463 - 9347655

39193

ENSAPLT00000005004

9308463 - 9347655

39193