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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9315699_9316700_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9315699 - 9316700

Intron Length:

1002

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGCAAT

5'SS Class:

major

3'SS Sequence:

CTTCTTCTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAA

U12 Branch Point Sequence:

CTGTCTTTAACC

Flanking Amino Acid:

LPEPTPVPSPELITTDIPQI

Intron Amino Acid Position:

544

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

71.6

40.1

Major BPS

74.7

0.61

65.9

40.9

Major PPT

84.9

0.79

0.7

80.9

24.3

Minor 5ss

42.3

-0.8

2.9

54.2

43.9

Minor BPS

77.8

0.85

1.2

77.71

38.7

Associated Gene:

Gene:

SUCO

Ensembl Gene ID:

ENSAPLG00000004827

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038122

9308463 - 9347655

39193

ENSAPLT00000005004

9308463 - 9347655

39193