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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9327058_9329015_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9327058 - 9329015

Intron Length:

1958

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

ATATTCGCAACT

Flanking Amino Acid:

LNASENLKREKDYKKTGEID

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.9

81.8

38.5

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

91.4

0.93

0.6

84.6

30.4

Minor 5ss

41.1

-1

2.9

57.9

46.4

Minor BPS

50.6

0.1

2.2

75.25

41.3

Associated Gene:

Gene:

SUCO

Ensembl Gene ID:

ENSAPLG00000004827

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038122

9308463 - 9347655

39193

ENSAPLT00000005004

9308463 - 9347655

39193