Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_9483692_9491879_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9483692 - 9491879

Intron Length:

8188

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCACC

5'SS Class:

major

3'SS Sequence:

CACCTCTGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTTAA

U12 Branch Point Sequence:

AAGAACTTAACT

Flanking Amino Acid:

QVNKSAVGNQVIRKGWLTIN

Intron Amino Acid Position:

510

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

69.7

41.3

Major BPS

65.6

0.39

0.9

55.7

32.1

Major PPT

65.8

0.36

0.9

59.8

35.2

Minor 5ss

39.3

-1.2

3.1

52.3

44.6

Minor BPS

0.49

1.6

73.97

Associated Gene:

Gene:

DNM3

Ensembl Gene ID:

ENSAPLG00000004816

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004961

9378869 - 9539795

160927