Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_9495633_9498936_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9495633 - 9498936

Intron Length:

3304

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCCTAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCACAT

U12 Branch Point Sequence:

TCTCCCCTAATA

Flanking Amino Acid:

REREEKTKDQVLLLIDIQVS

Intron Amino Acid Position:

470

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.8

73.9

29.7

Major BPS

65.1

0.38

1.1

71.2

35.2

Major PPT

70.6

0.46

0.8

66.2

28.5

Minor 5ss

25.3

-2.8

3.1

30.4

42.9

Minor BPS

63.8

0.43

1.7

73.63

38.2

Associated Gene:

Gene:

DNM3

Ensembl Gene ID:

ENSAPLG00000004816

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046547

9375933 - 9539795

163863

ENSAPLT00000028341

9378869 - 9540029

161161

ENSAPLT00000004961

9378869 - 9539795

160927

ENSAPLT00000046644

9378869 - 9539795

160927