Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_949787_950295_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

949787 - 950295

Intron Length:

509

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATATGTA

5'SS Class:

major

3'SS Sequence:

ATGTGTTTTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATAAA

U12 Branch Point Sequence:

TGCTGATAAACC

Flanking Amino Acid:

QVKDLEEHWQRHLARTTGRW

Intron Amino Acid Position:

546

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

76.5

32.2

Major BPS

63.5

0.33

1.2

64.3

39.6

Major PPT

76.4

0.59

0.9

Minor 5ss

41.7

-0.9

3.2

57.6

47.1

Minor BPS

45.7

-0.3

2.3

59.92

Associated Gene:

Gene:

EVI5

Ensembl Gene ID:

ENSAPLG00000015768

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016487

913107 - 975883

62777

ENSAPLT00000033885

913107 - 975964

62858

ENSAPLT00000029498

913107 - 985368

72262

ENSAPLT00000027562

913107 - 985368

72262

ENSAPLT00000044062

929293 - 976526

47234

ENSAPLT00000026338

913107 - 975964

62858

ENSAPLT00000043084

929293 - 976526

47234