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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9502803_9504647_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
9502803 - 9504647

Intron Length:
1845

Sequence Information:

Terminal Dinucleotides:
GC-AG

5'SS Sequence:
CAG|GCAAGTGCT

5'SS Class:
strong_major

3'SS Sequence:
TTCATGTCCACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTCAT

U12 Branch Point Sequence:
TATTCTTTCATG

Flanking Amino Acid:
SYAIKNIHGIRTGLFTPDMA

Intron Amino Acid Position:
394

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
99.4
1.17
0.7
94.5
13

Major BPS
87.6
0.93
0.9
89.3
26

Major PPT
74.5
0.55
0.9
68.2
37.4

Minor 5ss
25
-2.9
4
41.3
45.2

Minor BPS
61.4
0.21
1.8
68.01
40.3

Associated Gene:

Gene:
DNM3

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

9375933 - 9539795
163863

9378869 - 9540029
161161

9378869 - 9539795
160927