Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_952482_961394_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

952482 - 961394

Intron Length:

8913

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

GCAAACTTTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

TCATACTAAACG

Flanking Amino Acid:

LKQRIETLEKHKCSSRYSED

Intron Amino Acid Position:

466

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

84.6

33.2

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

62.3

0.28

54.5

40.7

Minor 5ss

41.1

-1

2.8

51.8

38.9

Minor BPS

53.8

-0

61.1

46.3

Associated Gene:

Gene:

EVI5

Ensembl Gene ID:

ENSAPLG00000015768

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043084

929293 - 976526

47234