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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9597115_9602045_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9597115 - 9602045

Intron Length:

4931

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTCTTCACA

Flanking Amino Acid:

SAPEFGTNTKESVTDYTTPS

Intron Amino Acid Position:

2050

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.7

23.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

91.6

0.94

0.6

87.6

22.6

Minor 5ss

32.8

-2

2.9

39.7

45.8

Minor BPS

75.4

0.79

1.7

86.69

32.1

Associated Gene:

Gene:

PRRC2C

Ensembl Gene ID:

ENSAPLG00000003698

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045233

9575375 - 9644273

68899

ENSAPLT00000039159

9576288 - 9644273

67986