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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9606849_9607479_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9606849 - 9607479

Intron Length:

631

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTATGTATT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTTCTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTATAT

U12 Branch Point Sequence:

GCCTCTATATCT

Flanking Amino Acid:

LSQFDLNNYASVVIIDDHPE

Intron Amino Acid Position:

1707

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

0.9

86.3

Major BPS

66.7

0.41

1.1

63.2

42.8

Major PPT

83.8

0.76

0.7

79.9

25.8

Minor 5ss

49.5

-0

2.5

68.8

35.6

Minor BPS

48.5

-0

1.9

65.06

45.5

Associated Gene:

Gene:

PRRC2C

Ensembl Gene ID:

ENSAPLG00000003698

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003853

9576288 - 9644273

67986

ENSAPLT00000045233

9575375 - 9644273

68899

ENSAPLT00000039159

9576288 - 9644273

67986