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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9611974_9612893_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9611974 - 9612893

Intron Length:

920

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAATCT

5'SS Class:

strong_major

3'SS Sequence:

AAACCTGTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TTGAAATTAAAC

Flanking Amino Acid:

PAMDMPPIHPGIMPPKPLMR

Intron Amino Acid Position:

777

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

77.5

31.3

Major BPS

73.8

0.59

0.9

26.8

Major PPT

65.3

0.35

54.6

44.7

Minor 5ss

39.9

-1.1

3.2

57.4

46.8

Minor BPS

48.6

-0.1

1.9

63.19

41.3

Associated Gene:

Gene:

PRRC2C

Ensembl Gene ID:

ENSAPLG00000003698

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045233

9575375 - 9644273

68899

ENSAPLT00000039159

9576288 - 9644273

67986

ENSAPLT00000003853

9576288 - 9644273

67986