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Intron Name: Anas_platyrhynchos_platyrhynchos_8_965932_966129_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
965932 - 966129

Intron Length:
198

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGTGTACA

5'SS Class:
strong_major

3'SS Sequence:
TTTTCTTTTCCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTCTCAT

U12 Branch Point Sequence:
TTTTTCTCATTT

Flanking Amino Acid:
CMYQFECMIQEHLPELYVHF

Intron Amino Acid Position:
256

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84.7
0.82
0.8
78.5
30.2

Major BPS
94.9
1.12
0.6
93.9
14.7

Major PPT
95
1.01
0.6
88.4
28.7

Minor 5ss
36.7
-1.5
2.5
43
44

Minor BPS
62.3
0.47
1.8
83.64
37.8

Associated Gene:

Gene:
EVI5

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

913107 - 975883
62777

913107 - 975964
62858

913107 - 985368
72262

913107 - 985368
72262

929293 - 976526
47234

913107 - 975964
62858

929293 - 976526
47234