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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9665222_9665624_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
9665222 - 9665624

Intron Length:
403

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGG|GTGGGTGCA

5'SS Class:
major

3'SS Sequence:
CTGTTCTCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTAAT

U12 Branch Point Sequence:
CCTTTGCTAATG

Flanking Amino Acid:
QCRWTIKVFQGQCTLPPVSK

Intron Amino Acid Position:
396

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.7
0.51
1.1
62
38.8

Major BPS
79.3
0.73
1.1
77.9
34.9

Major PPT
77.2
0.61
0.8
69.4
36.9

Minor 5ss
25.7
-2.8
3.1
23.1
37.4

Minor BPS
43.9
-0.6
2.3
50.59
44.5

Associated Gene:

Gene:
FMO3

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

9663906 - 9670982
7077