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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9701096_9729049_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9701096 - 9729049

Intron Length:

27954

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTGCG

5'SS Class:

major

3'SS Sequence:

TTCTCTCTCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

ATATCTCCAATT

Flanking Amino Acid:

TSGSDTPQQDNDQLNSEEKK

Intron Amino Acid Position:

487

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.1

63.8

40.9

Major BPS

87.6

0.93

0.9

89.3

Major PPT

79.6

0.67

0.7

73.3

31.7

Minor 5ss

35.2

-1.7

3.2

47.3

42.1

Minor BPS

51.3

0.12

1.8

72.43

38.5

Associated Gene:

Gene:

PRRX1

Ensembl Gene ID:

ENSAPLG00000029163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032613

9694914 - 9730738

35825

ENSAPLT00000024849

9694914 - 9730508

35595