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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_9801749_9801927_R

Intron Information:

Intron Rank:
132050
Intron Class:
major
Intron Phase:
Intron Coordinates:
9801749 - 9801927
Intron Length:
179

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
ACG|GTAAGAATT
5'SS Class:
strong_major
3'SS Sequence:
TTTATTTTATTAG|G
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
ATTTTAT
U12 Branch Point Sequence:
TTTATTTTATTT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
85.8
0.84
0.9
84.9
32.3
Major BPS
87.7
0.94
0.8
77.7
36.7
Major PPT
81.2
0.7
0.9
82.4
33.8
Minor 5ss
39.9
-1.1
3.2
59.5
44.6
Minor BPS
61.8
0.45
1.6
79.69
37

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000018280
Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000047103
9801613 - 9803477
1865