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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9874549_9876848_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9874549 - 9876848

Intron Length:

2300

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

TCTTGATATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

TTTTTCTTGATA

Flanking Amino Acid:

SIFMENKNDMVEMDIVEKLV

Intron Amino Acid Position:

345

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

69.6

41.1

Major BPS

83.8

0.84

73.6

41.8

Major PPT

75.9

0.58

69.5

39.9

Minor 5ss

35.5

-1.7

3.4

47.8

42.4

Minor BPS

80.4

0.95

0.9

85.58

26.2

Associated Gene:

Gene:

KIFAP3

Ensembl Gene ID:

ENSAPLG00000002383

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026719

9862934 - 9929563

66630

ENSAPLT00000026486

9862934 - 9929563

66630

ENSAPLT00000012698

9868522 - 9912990

44469

ENSAPLT00000041245

9862934 - 9912990

50057

ENSAPLT00000002400

9862934 - 9929563

66630

ENSAPLT00000035522

9862934 - 9929563

66630