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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9877055_9877454_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9877055 - 9877454

Intron Length:

400

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAA|GCTGTTCGC

5'SS Class:

weak_major

3'SS Sequence:

ATAAAAGGAGTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAATAAA

U12 Branch Point Sequence:

TTGGTCTAAATA

Flanking Amino Acid:

SNTDISAGIAKSFLALSLMK

Intron Amino Acid Position:

413

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.5

0.04

1.4

51.7

41.9

Major BPS

0.3

62.3

30.4

Major PPT

46.3

-0.2

1.1

34.1

39.9

Minor 5ss

-3.3

3.6

27.9

28.6

Minor BPS

54.9

0.15

1.8

65.88

41.7

Associated Gene:

Gene:

KIFAP3

Ensembl Gene ID:

ENSAPLG00000002383

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026486

9862934 - 9929563

66630

ENSAPLT00000012698

9868522 - 9912990

44469

ENSAPLT00000002400

9862934 - 9929563

66630

ENSAPLT00000041245

9862934 - 9912990

50057

ENSAPLT00000035522

9862934 - 9929563

66630