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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9899156_9908006_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9899156 - 9908006

Intron Length:

8851

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAGGTCTG

5'SS Class:

major

3'SS Sequence:

TTTTGTTAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TTTTGTTAAACA

Flanking Amino Acid:

VCDNTLDIIAEYDEEWAKKI

Intron Amino Acid Position:

611

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

1.1

47.6

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

77.2

0.61

74.1

39.5

Minor 5ss

36.9

-1.5

3.3

50.1

46.1

Minor BPS

60.9

0.34

2.1

78.6

38.6

Associated Gene:

Gene:

KIFAP3

Ensembl Gene ID:

ENSAPLG00000002383

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026486

9862934 - 9929563

66630

ENSAPLT00000012698

9868522 - 9912990

44469

ENSAPLT00000041245

9862934 - 9912990

50057

ENSAPLT00000002400

9862934 - 9929563

66630

ENSAPLT00000035522

9862934 - 9929563

66630

ENSAPLT00000026719

9862934 - 9929563

66630