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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9938447_9939312_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9938447 - 9939312

Intron Length:

866

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTCAC

U12 Branch Point Sequence:

GGCAGCTCACGT

Flanking Amino Acid:

VCNFNEATPEFLCHVKSVRD

Intron Amino Acid Position:

156

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

70.2

40.3

Major BPS

0.28

1.1

63.1

35.8

Major PPT

86.8

0.83

0.7

81.2

23.8

Minor 5ss

-2.1

3.2

44.2

Minor BPS

35.6

-1

2.2

46.11

45.1

Associated Gene:

Gene:

SCYL3

Ensembl Gene ID:

ENSAPLG00000006730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027371

9937337 - 9950043

12707