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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9940970_9941622_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9940970 - 9941622

Intron Length:

653

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGTTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCAACAT

U12 Branch Point Sequence:

ACATGCCTGACA

Flanking Amino Acid:

LSSLLSHEFFRNDFLEVVNF

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

28.8

Major BPS

58.4

0.21

1.2

65.6

39.7

Major PPT

0.79

0.7

84.8

Minor 5ss

31.6

-2.1

3.1

46.4

Minor BPS

46.9

-0.2

2.1

58.11

41.3

Associated Gene:

Gene:

SCYL3

Ensembl Gene ID:

ENSAPLG00000006730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027371

9937337 - 9950043

12707

ENSAPLT00000007004

9937337 - 9949654

12318