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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9945066_9946833_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9945066 - 9946833

Intron Length:

1768

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGAT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAC

U12 Branch Point Sequence:

CTTTCTTTTCTT

Flanking Amino Acid:

FMKTADLSPEDSPSHVGSNR

Intron Amino Acid Position:

420

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

83.8

27.2

Major BPS

72.6

0.56

0.9

63.1

35.8

Major PPT

80.2

0.68

0.8

73.8

31.3

Minor 5ss

33.7

-1.9

3.4

48.7

47.5

Minor BPS

43.4

-0.4

3.6

74.98

42.6

Associated Gene:

Gene:

SCYL3

Ensembl Gene ID:

ENSAPLG00000006730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007004

9937337 - 9949654

12318

ENSAPLT00000027371

9937337 - 9950043

12707