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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9946978_9947610_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9946978 - 9947610

Intron Length:

633

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACCTT

5'SS Class:

strong_major

3'SS Sequence:

TTATCTTCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

TTATCTTCTACA

Flanking Amino Acid:

QQDNPLALKTGEQGTQLPLN

Intron Amino Acid Position:

468

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

75.1

41.1

Major BPS

82.1

0.8

71.6

36.4

Major PPT

85.8

0.81

0.8

80.6

31.2

Minor 5ss

43.2

-0.8

3.3

64.9

46.4

Minor BPS

57.4

0.23

1.9

72.38

39.2

Associated Gene:

Gene:

SCYL3

Ensembl Gene ID:

ENSAPLG00000006730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027371

9937337 - 9950043

12707

ENSAPLT00000007004

9937337 - 9949654

12318