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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9952686_9953061_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9952686 - 9953061

Intron Length:

376

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGGTA

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTGTAATTGACA

Flanking Amino Acid:

GKVFIPQEAQRQVIPQLLFL

Intron Amino Acid Position:

772

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

34.9

Major BPS

84.4

0.85

1.1

34.5

Major PPT

88.4

0.86

0.8

80.8

36.8

Minor 5ss

32.9

-2

3.6

46.7

48.6

Minor BPS

58.1

0.25

1.8

72.82

38.7

Associated Gene:

Gene:

C1orf112

Ensembl Gene ID:

ENSAPLG00000006447

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006702

9950763 - 9969693

18931