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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9953701_9954867_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9953701 - 9954867

Intron Length:

1167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

TGATCTGTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

TATCTTGTGATC

Flanking Amino Acid:

QFWTFLQAKQVSDVPCLQQT

Intron Amino Acid Position:

702

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.8

71.2

34.5

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

63.2

0.3

1.2

60.2

44.9

Minor 5ss

24.3

-3

3.1

29.7

43.1

Minor BPS

46.3

-0.3

1.9

58.64

34.6

Associated Gene:

Gene:

C1orf112

Ensembl Gene ID:

ENSAPLG00000006447

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006702

9950763 - 9969693

18931