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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9963051_9963410_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9963051 - 9963410

Intron Length:

360

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCCTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

TTTTCCCTACAG

Flanking Amino Acid:

FANSLVHYTKI*

Intron Amino Acid Position:

354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

87.9

29.3

Major BPS

79.7

0.74

79.6

35.6

Major PPT

90.4

0.91

0.6

85.1

22.6

Minor 5ss

44.7

-0.6

3.2

66.4

45.1

Minor BPS

53.3

-0

2.1

69.58

43.3

Associated Gene:

Gene:

C1orf112

Ensembl Gene ID:

ENSAPLG00000006447

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020831

9962965 - 9969693

6729