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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9963492_9963934_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9963492 - 9963934

Intron Length:

443

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATTTA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTGGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATTAA

U12 Branch Point Sequence:

AGTTTTAGAACT

Flanking Amino Acid:

AEEMKISDIQEGTDLRLFQK

Intron Amino Acid Position:

327

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.8

86.5

23.8

Major BPS

66.7

0.42

58.1

38.5

Major PPT

77.2

0.61

75.6

38.3

Minor 5ss

43.1

-0.8

2.9

58.1

46.5

Minor BPS

0.14

1.7

72.82

37.6

Associated Gene:

Gene:

C1orf112

Ensembl Gene ID:

ENSAPLG00000006447

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006702

9950763 - 9969693

18931

ENSAPLT00000020831

9962965 - 9969693

6729