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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9964074_9964604_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9964074 - 9964604

Intron Length:

531

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTACGTCTT

5'SS Class:

major

3'SS Sequence:

TCCTGCCTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTTAT

U12 Branch Point Sequence:

ATCTGCTTATAT

Flanking Amino Acid:

LHANTWKFIIKQSLKHHSLL

Intron Amino Acid Position:

280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

75.7

40.3

Major BPS

76.2

0.65

1.1

65.7

43.2

Major PPT

75.2

0.57

0.8

69.3

31.3

Minor 5ss

40.8

-1

3.3

58.8

39.9

Minor BPS

49.6

0.05

2.1

71.39

45.3

Associated Gene:

Gene:

C1orf112

Ensembl Gene ID:

ENSAPLG00000006447

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020831

9962965 - 9969693

6729

ENSAPLT00000006702

9950763 - 9969693

18931