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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9965229_9966131_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9965229 - 9966131

Intron Length:

903

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTCTC

5'SS Class:

strong_major

3'SS Sequence:

CCATTTCCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAA

U12 Branch Point Sequence:

CTTTATTTAACC

Flanking Amino Acid:

VIKNTFTHCKDSESVYCGHL

Intron Amino Acid Position:

198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

76.2

39.9

Major BPS

79.5

0.73

0.9

36.9

Major PPT

78.8

0.65

0.8

72.5

32.1

Minor 5ss

37.4

-1.4

3.3

52.4

44.8

Minor BPS

72.7

0.69

1.5

79.02

36.5

Associated Gene:

Gene:

C1orf112

Ensembl Gene ID:

ENSAPLG00000006447

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006702

9950763 - 9969693

18931

ENSAPLT00000020831

9962965 - 9969693

6729