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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9966273_9966761_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9966273 - 9966761

Intron Length:

489

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTCTA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTGATTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

TTGTTCTTGATT

Flanking Amino Acid:

LCSTVRNLLQTVVQLLETLT

Intron Amino Acid Position:

151

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.1

1.14

0.7

85.1

31.7

Major BPS

83.8

0.84

73.6

41.8

Major PPT

72.3

0.5

1.1

Minor 5ss

27.5

-2.6

3.9

40.7

45.5

Minor BPS

76.2

0.91

1.1

86.06

34.4

Associated Gene:

Gene:

C1orf112

Ensembl Gene ID:

ENSAPLG00000006447

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020831

9962965 - 9969693

6729

ENSAPLT00000006702

9950763 - 9969693

18931