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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9966867_9968111_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9966867 - 9968111

Intron Length:

1245

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGACAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTGACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

AAATTTTTAAGT

Flanking Amino Acid:

QTFFSKVLPKTLQLYDNLMY

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

0.9

67.7

37.5

Major BPS

87.3

0.93

0.8

36.5

Major PPT

86.4

0.82

0.9

84.2

30.9

Minor 5ss

38.3

-1.3

50.3

46.3

Minor BPS

60.2

0.4

1.6

71.76

39.2

Associated Gene:

Gene:

C1orf112

Ensembl Gene ID:

ENSAPLG00000006447

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006702

9950763 - 9969693

18931

ENSAPLT00000020831

9962965 - 9969693

6729