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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9968201_9968922_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9968201 - 9968922

Intron Length:

722

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTC|GTAAGTAGT

5'SS Class:

major

3'SS Sequence:

CTTTGCTTCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAGAC

U12 Branch Point Sequence:

CTTTCAGTAACA

Flanking Amino Acid:

QESEDWTEHVRVLRIMTEMF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.3

74.5

41.9

Major BPS

69.3

0.48

1.1

66.7

Major PPT

81.7

0.71

0.8

76.4

32.2

Minor 5ss

-1.2

2.8

52.1

Minor BPS

57.3

0.23

2.3

76.36

40.9

Associated Gene:

Gene:

C1orf112

Ensembl Gene ID:

ENSAPLG00000006447

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020831

9962965 - 9969693

6729

ENSAPLT00000006702

9950763 - 9969693

18931