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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9997866_10000870_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9997866 - 10000870

Intron Length:

3005

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCTTTC

5'SS Class:

major

3'SS Sequence:

CTTATGCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

GAGTTCTTATGC

Flanking Amino Acid:

NWSEEQPSCEAVTCPAPSIA

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

1.2

73.4

38.9

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

80.8

0.69

0.9

37.1

Minor 5ss

49.2

-0

2.8

70.3

40.3

Minor BPS

48.2

-0.1

1.9

55.56

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046599

9985444 - 10003101

17658