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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9998496_9998948_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9998496 - 9998948

Intron Length:

453

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCTTTT

5'SS Class:

major

3'SS Sequence:

CTTATGCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

GAGTTCTTATGC

Flanking Amino Acid:

NWTKEQPSCKAVTCPVPSIA

Intron Amino Acid Position:

300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.2

37.9

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

80.8

0.69

0.9

37.1

Minor 5ss

52.2

0.08

2.8

76.1

39.6

Minor BPS

48.2

-0.1

1.9

55.56

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039634

9995004 - 10003101

8098

ENSAPLT00000018526

9995004 - 10003101

8098

ENSAPLT00000006138

9995004 - 10003101

8098

ENSAPLT00000046088

9995004 - 10003101

8098