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Intron Name: Anas_platyrhynchos_platyrhynchos_9_10060172_10072045_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10060172 - 10072045

Intron Length:

11874

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGCCT

5'SS Class:

major

3'SS Sequence:

ATTTGTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TGGCTCTTAATT

Flanking Amino Acid:

RGYFTILGLPAMFQAVRALM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

44.2

Major BPS

0.92

0.9

86.2

29.1

Major PPT

86.6

0.82

0.8

81.1

35.9

Minor 5ss

-2.1

3.6

47.9

47.8

Minor BPS

69.9

0.7

1.2

77.75

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007955

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040143

10059121 - 10073624

14504