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Intron Name: Anas_platyrhynchos_platyrhynchos_9_10072646_10072896_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10072646 - 10072896

Intron Length:

251

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGGT

5'SS Class:

strong_major

3'SS Sequence:

CACTGTTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACATCAC

U12 Branch Point Sequence:

AAAGCAGTAACC

Flanking Amino Acid:

MYQGMQNVQNRYTFGSALFV

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

76.2

39.9

Major BPS

56.9

0.17

1.1

59.7

36.1

Major PPT

74.4

0.55

0.9

68.8

36.8

Minor 5ss

-1.9

3.5

49.2

47.1

Minor BPS

44.9

-0.4

2.2

56.23

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007955

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040143

10059121 - 10073624

14504

ENSAPLT00000008260

10066402 - 10073624

7223