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Intron Name: Anas_platyrhynchos_platyrhynchos_9_10085402_10085617_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10085402 - 10085617

Intron Length:

216

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGCCAA

5'SS Class:

major

3'SS Sequence:

CTCCACGCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCCAC

U12 Branch Point Sequence:

TCCTTCTCCACG

Flanking Amino Acid:

IASKSSAMEGKLQELQAREA

Intron Amino Acid Position:

341

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

61.1

41.3

Major BPS

54.8

0.12

1.3

66.4

39.9

Major PPT

68.9

0.43

0.9

61.3

34.7

Minor 5ss

31.3

-2.1

30.1

Minor BPS

47.5

-0.3

2.1

54.4

46.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007941

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008240

10081515 - 10088252

6738