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Intron Name: Anas_platyrhynchos_platyrhynchos_9_10115311_10121791_F

Intron Information:

Intron Rank:

146351

Intron Class:

major

Intron Phase:

Intron Coordinates:

10115311 - 10121791

Intron Length:

6481

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TATCTTCATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

CATCCTTTATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

64.9

41.1

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

79.1

0.65

0.9

73.5

35.8

Minor 5ss

26.8

-2.7

28.2

38.6

Minor BPS

60.7

0.41

1.6

74.42

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028849

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022155

10111816 - 10121967

10152