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Intron Name: Anas_platyrhynchos_platyrhynchos_9_10334262_10342515_R

Intron Information:

Intron Rank:

148371

Intron Class:

major

Intron Phase:

Intron Coordinates:

10334262 - 10342515

Intron Length:

8254

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGAG

5'SS Class:

strong_major

3'SS Sequence:

CTGCTTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCTT

U12 Branch Point Sequence:

CCTGCCTTGTCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.1

37.5

Major BPS

33.6

-1

4.3

71.4

45.1

Major PPT

74.6

0.55

0.8

69.2

31.4

Minor 5ss

23.1

-3.1

3.2

27.7

44.2

Minor BPS

44.1

-0.3

3.5

70.37

47.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027206

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039103

10331873 - 10342908

11036

ENSAPLT00000026418

10329599 - 10342908

13310