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Intron Name: Anas_platyrhynchos_platyrhynchos_9_10477059_10477161_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10477059 - 10477161

Intron Length:

103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGGCGA

5'SS Class:

major

3'SS Sequence:

TTTCTGATCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

CCATCCTGACCT

Flanking Amino Acid:

ENGALDSFLRQNDGQFTVIQ

Intron Amino Acid Position:

731

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

60.5

45.8

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

78.9

0.65

0.9

73.6

35.5

Minor 5ss

29.7

-2.3

3.2

30.2

42.9

Minor BPS

54.4

0.22

1.8

69.42

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005830

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026539

10474108 - 10499094

24987

ENSAPLT00000024625

10474301 - 10498672

24372

ENSAPLT00000006130

10474108 - 10499094

24987

ENSAPLT00000040630

10474108 - 10498759

24652

ENSAPLT00000034231

10474108 - 10498672

24565