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Intron Name: Anas_platyrhynchos_platyrhynchos_9_10478568_10480706_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10478568 - 10480706

Intron Length:

2139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTGGGGTTG

5'SS Class:

weak_major

3'SS Sequence:

TTCTCATGACAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTTCTCATGACA

Flanking Amino Acid:

QDRGEGSGWLWSPGMKIYID

Intron Amino Acid Position:

607

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.4

0.15

1.1

52.1

41.2

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

57.5

0.17

1.2

57.6

41.5

Minor 5ss

36.1

-1.6

3.7

51.3

46.9

Minor BPS

62.4

0.38

1.6

76.83

33.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005830

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006130

10474108 - 10499094

24987