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Intron Name: Anas_platyrhynchos_platyrhynchos_9_10478568_10481006_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10478568 - 10481006

Intron Length:

2439

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GCA|GCAGGTGAG

5'SS Class:

major

3'SS Sequence:

TTCTCATGACAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTTCTCATGACA

Flanking Amino Acid:

VSLVAISIVCRSPGMKIYID

Intron Amino Acid Position:

542

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.2

0.29

1.4

58.6

43.7

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

57.5

0.17

1.2

57.6

41.5

Minor 5ss

22.5

-3.2

4.1

35.6

42.4

Minor BPS

62.4

0.38

1.6

76.83

33.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005830

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024625

10474301 - 10498672

24372

ENSAPLT00000026539

10474108 - 10499094

24987