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Intron Name: Anas_platyrhynchos_platyrhynchos_9_10481086_10483265_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10481086 - 10483265

Intron Length:

2180

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GTG|GCCGGGGTG

5'SS Class:

major

3'SS Sequence:

CGAGCTGAGGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACAAAT

U12 Branch Point Sequence:

ATGACTACAAAT

Flanking Amino Acid:

FQTLTDGERVQLPLIAGSAA

Intron Amino Acid Position:

546

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.38

1.2

62.5

39.2

Major BPS

69.5

0.48

73.5

28.6

Major PPT

40.7

-0.5

1.7

40.1

Minor 5ss

16.7

-3.8

4.1

38.6

Minor BPS

44.6

-0.3

1.8

61.99

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005830

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026539

10474108 - 10499094

24987

ENSAPLT00000006130

10474108 - 10499094

24987