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Intron Name: Anas_platyrhynchos_platyrhynchos_9_10481112_10483276_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10481112 - 10483276

Intron Length:

2165

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGCGAG

5'SS Class:

major

3'SS Sequence:

TTCTCTCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTCAC

U12 Branch Point Sequence:

GAGGGCTCACCT

Flanking Amino Acid:

GKMCFQTLTDDDYKSELREQ

Intron Amino Acid Position:

507

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

61.1

39.6

Major BPS

52.1

0.05

1.3

41.8

Major PPT

86.1

0.81

0.7

81.1

Minor 5ss

30.4

-2.2

3.3

34.2

43.1

Minor BPS

40.7

-0.6

2.2

53.79

47.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005830

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024625

10474301 - 10498672

24372