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Intron Name: Anas_platyrhynchos_platyrhynchos_9_10485682_10488171_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10485682 - 10488171

Intron Length:

2490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

TCCTTCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAA

U12 Branch Point Sequence:

CCCGTCTCAACC

Flanking Amino Acid:

DLDPPAAACTSVPSGPRNVI

Intron Amino Acid Position:

334

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

78.5

35.5

Major BPS

0.45

1.2

71.6

36.4

Major PPT

78.1

0.63

0.7

72.3

Minor 5ss

40.6

-1.1

2.8

58.6

39.3

Minor BPS

48.7

-0.1

1.7

53.1

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005830

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026539

10474108 - 10499094

24987

ENSAPLT00000024625

10474301 - 10498672

24372

ENSAPLT00000006130

10474108 - 10499094

24987

ENSAPLT00000040630

10474108 - 10498759

24652

ENSAPLT00000034231

10474108 - 10498672

24565