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Intron Name: Anas_platyrhynchos_platyrhynchos_9_10488328_10495729_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10488328 - 10495729

Intron Length:

7402

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGTTG

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCCCAT

U12 Branch Point Sequence:

CCGAGCACAACC

Flanking Amino Acid:

YEPENNVACKACPAGTFKAS

Intron Amino Acid Position:

282

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

70.4

42.5

Major BPS

54.5

0.11

1.4

66.4

42.2

Major PPT

0.88

0.6

84.1

23.9

Minor 5ss

38.9

-1.2

3.6

54.5

49.7

Minor BPS

39.3

-0.8

2.1

43.88

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005830

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026539

10474108 - 10499094

24987

ENSAPLT00000024625

10474301 - 10498672

24372

ENSAPLT00000006130

10474108 - 10499094

24987

ENSAPLT00000040630

10474108 - 10498759

24652